구성원
  • HOME
  • 구성원
  • 전임교원
전임교원
김소연So Yeon Kim

전공 : 소프트웨어학과

학위 : 박사

이메일 : jebi1771@gmail.com

연구실 : 성호관 405호

연구실번호 : 3535

연구실관심분야 : Graph representation learning / Machine learning / Bioinformatics

홈페이지 : https://sykim122.github.io/, https://sites.google.com/site/kasohn/group

학력
  • 2021.2 아주대학교 박사
경력
  • [2021.9 ~ ] 아주대학교 인공지능학과 조교수
  • [2020.1 - 2021.8] Samsung Genome Institute, Samsung Medical Center, Seoul, Korea
  • Department of Digital Health, SAIHST, Sungkyunkwan University, Samsung Medical Center, Seoul, Korea
  • Research area: Bioinformatics, Cancer analysis
연구활동(주요논문)
  • [논문] So Yeon Kim, Eun Kyung Choe, Manu Shivakumar, Dokyoon Kim* and Kyung-Ah Sohn*. iDRW: integrative directed random walks on multi-layered gene-gene graph to infer pathway activity for outcome prediction in urologic cancer. Bioinformatics, 37(16):2405-2413
  • [논문] Eun Kyung Choe, Sangwoo Lee, So Yeon Kim, Manu Shivakumar, Kyu Joo Park, Young Jun Chai, Dokyoon Kim*. (2021) Prognostic effect of inflammatory genes on stage I-III colorectal cancer - integrative analysis of TCGA data. Cancers, 13(4):751
  • [논문] So Yeon Kim, Hyun-Hwan Jeong, Jaesik Kim, Jeong-Hyeon Moon and Kyung-Ah Sohn*. (2019) Robust Pathway-based Multi-Omics Data Integration using Directed Random Walk for Survival Prediction in Multiple Cancer Studies. Biology Direct, 14(1):8
  • [논문] So Yeon Kim, Tae Rim Kim, Hyun-Hwan Jeong and Kyung-Ah Sohn*. (2018) Integrative Pathway based Survival Prediction utilizing Interaction between Gene Expression and DNA Methylation in Breast Cancer. BMC Medical Genomics, 11(Suppl 3):68
  • [논문] So Yeon Kim and Kyung-Ah Sohn*. (2017) Multi-view network-based social-tagged landmark image clustering. 2017 IEEE International Conference on Image Processing (ICIP)
국제학술논문지
  • [논문] Hang-Rai Kim, Sang-Hyuk Jung, Jaeho Kim, Hyemin Jang, Sung Hoon Kang, Song Hwangbo, Jun Pyo Kim, So Yeon Kim, Beomsu Kim, Soyeon Kim, Jee Hyang Jeong, Soo Jin Yoon, Kyung Won Park, Eun-Joo Kim, Bora Yoon, Jae-Won Jang, Jin Yong Hong, Seong Hye Choi, Young Noh, Ko Woon Kim, Si Eun Kim, Jin San Lee, Na-Yeon Jung, Juyoun Lee, Byeong C. Kim, Sang Joon Son, Chang Hyung Hong, Duk L. Na, Sang Won Seo, Hong-Hee Won, Hee Jin Kim. (2021) Identifying novel genetic variants for brain amyloid deposition: a genome-wide association study in the Korean population. Alzheimer’s Research & Therapy, 13(1): 1-11
  • [논문] So Yeon Kim, Eun Kyung Choe, Manu Shivakumar, Dokyoon Kim* and Kyung-Ah Sohn*. iDRW: integrative directed random walks on multi-layered gene-gene graph to infer pathway activity for outcome prediction in urologic cancer. Bioinformatics, 37(16):2405-2413
  • [논문] Eun Kyung Choe, Sangwoo Lee, So Yeon Kim, Manu Shivakumar, Kyu Joo Park, Young Jun Chai, Dokyoon Kim*. (2021) Prognostic effect of inflammatory genes on stage I-III colorectal cancer - integrative analysis of TCGA data. Cancers, 13(4):751
  • [논문] Sangwoo Lee, Eun Kyung Choe, So Yeon Kim, Hua Sun Kim, Kyu Joo Park* and Dokyoon Kim*. (2020) Liver imaging features by convolutional neural network to predict the metachronous liver metastasis in stage I-III colorectal cancer patients based on preoperative abdominal CT scan. BMC Bioinformatics, 14(1): 8
  • [논문] So Yeon Kim, Hyun-Hwan Jeong, Jaesik Kim, Jeong-Hyeon Moon and Kyung-Ah Sohn*. (2019) Robust Pathway-based Multi-Omics Data Integration using Directed Random Walk for Survival Prediction in Multiple Cancer Studies. Biology Direct, 14(1):8
  • [논문] So Yeon Kim, Tae Rim Kim, Hyun-Hwan Jeong and Kyung-Ah Sohn*. (2018) Integrative Pathway based Survival Prediction utilizing Interaction between Gene Expression and DNA Methylation in Breast Cancer. BMC Medical Genomics, 11(Suppl 3):68
  • [논문] So Yeon Kim and Kyung-Ah Sohn*. (2017) Multi-view network-based social-tagged landmark image clustering. 2017 IEEE International Conference on Image Processing (ICIP)
  • [논문] Garam Lee, Lisa Bang, So Yeon Kim, Dokyoon Kim and Kyung-Ah Sohn*. (2017) Identifying subtype-specific associations between gene expression and DNA methylation profiles in breast cancer. BMC medical genomics, 10(1), 28
  • [논문] Moon Soo Cha, So Yeon Kim, Jae Hee Ha, Min-June Lee, Young-June Choi and Kyung-Ah Sohn*. (2016) Topic Model based Approach for Improved Indexing in Content based Document Retrieval. International Journal of Networked and Distributed Computing, 4(1), 55-64
  • [논문] Hyun-hwan Jeong, So Yeon Kim, Kyubum Wee and Kyung-Ah Sohn*. (2015) Investigating the utility of clinical outcome-guided mutual information network in network-based Cox regression. BMC systems biology, 9(Suppl 1), S8
  • [논문] So Yeon Kim and Kyung-Ah Sohn*. (2015) Graph-Based Spam Image Detection for Mobile Phone Spam Image Filtering. International Journal of Software Innovation 3(4):72-86
국제학술발표
  • [학술회의] So Yeon Kim, Eun Kyung Choe, Manu Shivakumar, Dokyoon Kim* and Kyung-Ah Sohn*. Presented “An integrative pathway activity inference method on multi-omics data using directed random walks for clinical outcome prediction in urologic cancers” at American Society of Human Genetics 2019 Annual Meeting (ASHG 2019), October 2019, Houston, TX, USA
  • [학술회의] So Yeon Kim, Eun Kyung Choe, Manu Shivakumar, Dokyoon Kim* and Kyung-Ah Sohn*. Presented “A pathway activity inference on multi-omics data using directed random walks for predicting survival in bladder cancer” at the 2019 Annual Mid-Atlantic Bioinformatics Conference (MABC 2019), October 2019, Philadelphia, PA, USA
  • [학술회의] So Yeon Kim, Hyun-Hwan Jeong, Jaesik Kim, Jeong-Hyeon Moon and Kyung-Ah Sohn*. Presented “Robust Pathway-based Multi-Omics Data Integration using Directed Random Walk for Survival Prediction in Multiple Cancer Studies” at the 17th Annual International Conference on Critical Assessment of Massive Data Analysis (CAMDA 2018, ISMB COSI track), July 2018, Chicago, USA
  • [학술회의] So Yeon Kim, Tae Rim Kim, Hyun-Hwan Jeong and Kyung-Ah Sohn*. Presented “Integrative Pathway based Survival Prediction utilizing Interaction between Gene Expression and DNA Methylation in Breast Cancer” at Translational Bioinformatics Conference (TBC 2017), September 2018, Los Angeles, USA
  • [학술회의] So Yeon Kim and Kyung-Ah Sohn*. Presented “Multi-view network-based social-tagged landmark image clustering” at IEEE International Conference on Image Processing (ICIP 2017), September 2018, Beijing, China
  • [학술회의] So Yeon Kim, Sungdo Gu, Hyun-hwan Jeong and Kyung-Ah Sohn*. Presented “A Network Clustering Based Software Attribute Selection for Identifying Fault-Prone Modules” at the 5th International Conference on IT Convergence and Security (ICITCS 2015), August 2015, Kuala Lumpur, Malaysia
  • [학술회의] Sungdo Gu, So Yeon Kim, Hyun-hwan Jeong and Kyung-Ah Sohn*. Presented “Constructing and Exploiting Software Metrics Networks for Software Quality Assessment” at the 5th International Conference on IT Convergence and Security (ICITCS 2015), August 2015, Kuala Lumpur, Malaysia
  • [학술회의] So Yeon Kim and Kyung-Ah Sohn*. Presented “Mobile phone spam image detection based on graph partitioning with Pyramid Histogram of Visual Words image descriptor” at the IEEE/ACIS 14th International Conference on Computer and Information Science (ICIS 2015), June 2015, Las Vegas, USA
  • [학술회의] Moon Soo Cha, So Yeon Kim, Jae Hee Ha, Min-June Lee, Young-June Choi and Kyung-Ah Sohn*. Presented “CBDIR: Fast and effective content based document Information Retrieval system” at the IEEE/ACIS 14th International Conference on Computer and Information Science (ICIS 2015), June 2015, Las Vegas, USA
  • [학술회의] So Yeon Kim, Yenewondim Biadgie and Kyung-Ah Sohn*. Presented “Investigating the Effectiveness of E-mail Spam Image Data for Phone Spam Image Detection Using Scale Invariant Feature Transform Image Descriptor” at the 6th International Conference on Information Science and Applications (ICISA 2015), February 2015, Pattaya, Thailand
  • [학술회의] Seung Woo Cho, Moon Soo Cha, So Yeon Kim, Joo Cheol Song and Kyung-Ah Sohn*. (2014) Investigating temporal and spatial trends of brand images using Twitter opinion mining. 2014 International Conference on Information Science and Applications (ICISA)

  • 권순선
    Soon-Sun Kwon

    전공 : 수학과(통계전공)

    학위 : 박사

    이메일 : qrio1010@ajou.ac.kr

  • 김상훈
    Sang-Hoon Kim

    전공 : 소프트웨어학과

    학위 : 박사

    이메일 : sanghoonkim@ajou.ac.kr

  • 김소연
    So Yeon Kim

    전공 : 소프트웨어학과

    학위 : 박사

    이메일 : jebi1771@gmail.com

  • 박정훈
    Junghoon Park

    전공 : 인공지능융합학과

    학위 : 박사

    이메일 : stevejobs@ajou.ac.kr / skyzami@gmail.com

  • 손경아
    Kyung-Ah Sohn

    전공 : 소프트웨어학과

    학위 : 박사

    이메일 : kasohn@ajou.ac.kr

  • 신현정
    Hyunjung Shin

    전공 : 산업공학전공(과)

    학위 : 박사

    이메일 : shin@ajou.ac.kr

  • 안정섭
    Jeongseob Ahn

    전공 : 소프트웨어학과

    학위 : 박사

    이메일 : jsahn@ajou.ac.kr

  • 오상윤
    Sangyoon Oh

    전공 : 소프트웨어학과

    학위 : 박사

    이메일 : syoh@ajou.ac.kr

  • 유리
    Ri Yu

    전공 : 소프트웨어학과

    학위 : 박사

    이메일 : riyu@ajou.ac.kr

  • 유종빈
    Jongbin ryu

    전공 : 소프트웨어학과

    학위 : 박사

    이메일 : jongbinryu@ajou.ac.kr

  • 윤대균
    Daekyun Yoon

    전공 : 소프트웨어학과

    학위 : 박사

    이메일 : dkyoon@ajou.ac.kr

  • 이석원
    Seokwon Lee

    전공 : 소프트웨어학과

    학위 : 박사

    이메일 : leesw@ajou.ac.kr

  • 이슬
    Sael Lee

    전공 : 소프트웨어학과

    학위 : 박사

    이메일 : sael@ajou.ac.kr

  • 정태선
    Tae-Sun Chung

    전공 : 소프트웨어학과

    학위 : 박사

    이메일 : tschung@ajou.ac.kr

  • 조다정
    Da-Jung Cho

    전공 : 소프트웨어학과

    학위 : 박사

    이메일 : dajungcho@ajou.ac.kr

  • 조현석
    Hyunsouk Cho

    전공 : 소프트웨어학과

    학위 : 박사

    이메일 : hyunsouk@ajou.ac.kr

  • 최영준
    Young-June Choi

    전공 : 소프트웨어학과

    학위 : 박사

    이메일 : choiyj@ajou.ac.kr

  • 허용석
    Yong Seok Heo

    전공 : 전자공학전공(과)

    학위 : 박사

    이메일 : ysheo@ajou.ac.kr

  • 황원준
    Wonjun Hwang

    전공 : 소프트웨어학과

    학위 : 박사

    이메일 : wjhwang@ajou.ac.kr